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<meta charset="utf-8">
<style>
.title {
font: 20px sans-serif;
fill: black;
}
.axis {
font: 10px sans-serif;
}
.axis path,
.axis line {
fill: none;
stroke: #000;
shape-rendering: crispEdges;
}
.x.axis path {
/*display: none;*/
}
</style>
<body>
<script src="https://d3js.org/d3.v3.min.js"></script>
<script>
var margin = {top: 20, right: 20, bottom: 80, left: 40},
width = 960 - margin.left - margin.right,
height = 500 - margin.top - margin.bottom;
var x = d3.scale.ordinal()
.rangeRoundBands([0, width], .1);
var y = d3.scale.linear()
.range([height, 0]);
var xAxis = d3.svg.axis()
.scale(x)
.orient("bottom");
var yAxis = d3.svg.axis()
.scale(y)
.orient("left");
//.ticks(10, "%");
var svg = d3.select("body").append("svg")
.attr("width", width + margin.left + margin.right)
.attr("height", height + margin.top + margin.bottom)
.append("g")
.attr("transform", "translate(" + margin.left + "," + margin.top + ")");
d3.csv("data.csv", type, function(error, data) {
if (error) throw error;
data = data.filter(function(row) {
return row['TimePoint'] == '5';
})
x.domain(data.map(function(d) { return d.GeneNumber; }));
y.domain([0, d3.max(data, function(d) { return d.Expression; })]);
svg.append("text")
.attr("class", "title")
.attr("text-anchor", "middle")
.attr("x", width/2)
.attr("y", 26)
.attr("shape-rendering", "crispEdges")
.text("Kampy Gene Number versus Expression (5 minutes post-infection)");
x_group = svg.append("g")
.attr("class", "x axis")
.attr("transform", "translate(0," + height + ")")
.call(xAxis);
x_group
.selectAll("text")
.attr("transform", function (d) {return "rotate(-60," + 0 + "," + 14 + ")"});
//x_group.selectAll(".tick").selectAll("text");
svg.append("g")
.attr("class", "axis")
.append("text")
.attr("font-size", 16)
.attr("text-anchor", "end")
.attr("x", width)
.attr("y", height + margin.bottom/2)
.attr("shape-rendering", "crispEdges")
.text("Kampy Gene Number");
svg.append("g")
.attr("class", "y axis")
.call(yAxis)
.append("text")
.attr("font-size", 16)
.attr("transform", "rotate(-90)")
.attr("y", 6)
.attr("dy", ".71em")
.style("text-anchor", "end")
.text("Expression (RPKM)");
svg.selectAll(".bar")
.data(data)
.enter().append("rect")
.attr("class", "bar")
.attr("x", function(d) { return x(d.GeneNumber); })
.attr("width", x.rangeBand())
.attr("y", function(d) { return y(d.Expression); })
.attr("height", function(d) { return height - y(d.Expression); });
});
function type(d) {
d.Expression = +d.Expression;
return d;
}
</script>
Modified http://d3js.org/d3.v3.min.js to a secure url
https://d3js.org/d3.v3.min.js